2013 Publications

2013 Publications

Gene Expression-Based Classifiers Identify Staphylococcus aureus Infection in Mice and Humans.
Ahn SH, Tsalik EL, Cyr DD, Zhang Y, van Velkinburgh JC, Langley RJ, Glickman SW, Cairns CB, Zaas AK, Rivers EP, Otero RM, Veldman T, Kingsmore SF, Lucas J, Woods CW, Ginsburg GS, Fowler VG Jr.
PLoS One. 2013;8(1):e48979. doi: 10.1371/journal.pone.0048979. Epub 2013 Jan 9.
[PubMed]

TP53 Status is Associated with Thrombospondin1 Expression In vitro.
Alvarez Secord A, Bernardini MQ, Broadwater G, Grace LA, Huang Z, Baba T, Kondoh E, Sfakianos G, Havrilesky LJ, Murphy SK.
Front Oncol. 2013 Oct 29;3:269. doi: 10.3389/fonc.2013.00269.
[PubMed]

Distinct and overlapping sarcoma subtypes initiated from muscle stem and progenitor cells.
Blum JM, Añó L, Li Z, Van Mater D, Bennett BD, Sachdeva M, Lagutina I, Zhang M, Mito JK, Dodd LG, Cardona DM, Dodd RD, Williams N, Ma Y, Lepper C, Linardic CM, Mukherjee S, Grosveld GC, Fan CM, Kirsch DG.
Cell Rep. 2013 Nov 27;5(4):933-40. doi: 10.1016/j.celrep.2013.10.020. Epub 2013 Nov 14.
[PubMed]

Immunoglobulin-like domain containing receptor 1 mediates fat-stimulated cholecystokinin secretion.
Chandra R, Wang Y, Shahid RA, Vigna SR, Freedman NJ, Liddle RA.
J Clin Invest. 2013 Aug 1;123(8):3343-52. doi: 10.1172/JCI68587. Epub 2013 Jul 25.
[PubMed]

Transcription Factors MYOCD, SRF, Mesp1 and SMARCD3 Enhance the Cardio-Inducing Effect of GATA4, TBX5, and MEF2C during Direct Cellular Reprogramming.
Christoforou N, Chellappan M, Adler AF, Kirkton RD, Wu T, Addis RC, Bursac N, Leong KW.
PLoS One. 2013 May 21;8(5):e63577. doi: 10.1371/journal.pone.0063577. Print 2013.
[PubMed]

MicroRNA Expression Differentiates Squamous Epithelium from Barrett's Esophagus and Esophageal Cancer.
Garman KS, Owzar K, Hauser ER, Westfall K, Anderson BR, Souza RF, Diehl AM, Provenzale D, Shaheen NJ.
Dig Dis Sci. 2013 Aug 8. [Epub ahead of print]
[PubMed]

β -Arrestin-Selective G Protein-Coupled Receptor Agonists Engender Unique Biological Efficacy in Vivo.
Gesty-Palmer D, Yuan L, Martin B, Wood WH 3rd, Lee MH, Janech MG, Tsoi LC, Zheng WJ, Luttrell LM, Maudsley S.
Mol Endocrinol. 2013 Feb;27(2):296-314. doi: 10.1210/me.2012-1091. Epub 2013 Jan 11.
[PubMed]

Type III TGF-β receptor downregulation generates an immunotolerant tumor microenvironment.
Hanks BA, Holtzhausen A, Evans KS, Jamieson R, Gimpel P, Campbell OM, Hector-Greene M, Sun L, Tewari A, George A, Starr M, Nixon A, Augustine C, Beasley G, Tyler DS, Osada T, Morse MA, Ling L, Lyerly HK, Blobe GC.
J Clin Invest. 2013 Sep 3;123(9):3925-40. doi: 10.1172/JCI65745. Epub 2013 Aug 8.
[PubMed]

Pdx-1 activates islet α- and β-cell proliferation via a mechanism regulated by transient receptor potential cation channels 3 and 6 and extracellular signal-regulated kinases 1 and 2.
Hayes HL, Moss LG, Schisler JC, Haldeman JM, Zhang Z, Rosenberg PB, Newgard CB, Hohmeier HE.
Mol Cell Biol. 2013 Oct;33(20):4017-29. doi: 10.1128/MCB.00469-13. Epub 2013 Aug 12.
[PubMed]

Interaction of E2F7 transcription factor with E2F1 and C-terminal-binding protein (CtBP) provides a mechanism for E2F7-dependent transcription repression.
Liu B, Shats I, Angus SP, Gatza ML, Nevins JR.
J Biol Chem. 2013 Aug 23;288(34):24581-9. doi: 10.1074/jbc.M113.467506. Epub 2013 Jul 13.
[PubMed]

Fish oil slows prostate cancer xenograft growth relative to other dietary fats and is associated with decreased mitochondrial and insulin pathway gene expression.
Lloyd JC, Masko EM, Wu C, Keenan MM, Pilla DM, Aronson WJ, Chi JT, Freedland SJ.
Prostate Cancer Prostatic Dis. 2013 Dec;16(4):285-91. doi: 10.1038/pcan.2013.19. Epub 2013 Jul 23.
[PubMed]

Changes in Gene Expression of Pial Vessels of the Blood Brain Barrier during Murine Neurocysticercosis.
Mishra PK, Teale JM.
PLoS Negl Trop Dis. 2013 Mar;7(3):e2099. doi: 10.1371/journal.pntd.0002099. Epub 2013 Mar 14.
[PubMed]

27-Hydroxycholesterol links hypercholesterolemia and breast cancer pathophysiology.
Nelson ER, Wardell SE, Jasper JS, Park S, Suchindran S, Howe MK, Carver NJ, Pillai RV, Sullivan PM, Sondhi V, Umetani M, Geradts J, McDonnell DP.
Science. 2013 Nov 29;342(6162):1094-8. doi: 10.1126/science.1241908.
[PubMed]

Hepatocyte nuclear factor-1β (HNF-1β) promotes glucose uptake and glycolytic activity in ovarian clear cell carcinoma.
Okamoto T, Mandai M, Matsumura N, Yamaguchi K, Kondoh H, Amano Y, Baba T, Hamanishi J, Abiko K, Kosaka K, Murphy SK, Mori S, Konishi I.
Mol Carcinog. 2013 Sep 17. doi: 10.1002/mc.22072. [Epub ahead of print]
[PubMed]

EndoU is a novel regulator of AICD during peripheral B cell selection.
Poe JC, Kountikov EI, Lykken JM, Natarajan A, Marchuk DA, Tedder TF.
J Exp Med. 2013 Dec 16. [Epub ahead of print]
[PubMed]

Iron-Responsive miR-485-3p Regulates Cellular Iron Homeostasis by Targeting Ferroportin.
Sangokoya C, Doss JF, Chi JT.
PLoS Genet. 2013 Apr;9(4):e1003408. doi: 10.1371/journal.pgen.1003408. Epub 2013 Apr 4.
[PubMed]

Host Gene Expression Profiling and In Vivo Cytokine Studies to Characterize the Role of Linezolid and Vancomycin in Methicillin-Resistant Staphylococcus aureus (MRSA) Murine Sepsis Model.
Sharma-Kuinkel BK, Zhang Y, Yan Q, Ahn SH, Fowler VG Jr.
PLoS One. 2013;8(4):e60463. doi: 10.1371/journal.pone.0060463. Epub 2013 Apr 2.
[PubMed]

FOXO transcription factors control E2F1 transcriptional specificity and apoptotic function.
Shats I, Gatza ML, Liu B, Angus SP, You L, Nevins JR.
Cancer Res. 2013 Oct 1;73(19):6056-67. doi: 10.1158/0008-5472.CAN-13-0453. Epub 2013 Aug 21.
[PubMed]

PAK1 Mediates Resistance to PI3 Kinase Inhibition in Lymphomas.
Walsh KJ, McKinney MS, Love C, Liu Q, Fan A, Patel A, Smith JL, Beaven AW, Jima DD, Dave SS.
Clin Cancer Res. 2013 Jan 8. [Epub ahead of print]
[PubMed]

A Host Transcriptional Signature for Presymptomatic Detection of Infection in Humans Exposed to Influenza H1N1 or H3N2.
Woods CW, McClain MT, Chen M, Zaas AK, Nicholson BP, Varkey J, Veldman T, Kingsmore SF, Huang Y, Lambkin-Williams R, Gilbert AG, Hero AO 3rd, Ramsburg E, Glickman S, Lucas JE, Carin L, Ginsburg GS.
PLoS One. 2013;8(1):e52198. doi: 10.1371/journal.pone.0052198. Epub 2013 Jan 9.
[PubMed]

Host Gene Expression Profiling and In Vivo Cytokine Studies to Characterize the Role of Linezolid and Vancomycin in Methicillin-Resistant Staphylococcus aureus (MRSA) Murine Sepsis Model.
Sharma-Kuinkel BK, Zhang Y, Yan Q, Ahn SH, Fowler VG Jr.
PLoS One. 2013;8(4):e60463. doi: 10.1371/journal.pone.0060463. Epub 2013 Apr 2.
[PubMed]

Bone marrow biopsy: RNA isolation with expression profiling in men with metastatic castration-resistant prostate cancer--factors affecting diagnostic success.
Spritzer CE, Afonso PD, Vinson EN, Turnbull JD, Morris KK, Foye A, Madden JF, Roy Choudhury K, Febbo PG, George DJ.
Radiology. 2013 Dec;269(3):816-23. doi: 10.1148/radiol.13121782. Epub 2013 Oct 28.
[PubMed]

Salicylic Acid activates DNA damage responses to potentiate plant immunity.
Yan S, Wang W, Marqués J, Mohan R, Saleh A, Durrant WE, Song J, Dong X.
Mol Cell. 2013 Nov 21;52(4):602-10. doi: 10.1016/j.molcel.2013.09.019. Epub 2013 Oct 24.
[PubMed]

Adaptive response of vascular endothelial cells to an acute increase in shear stress frequency.
Zhang J, Friedman MH.
Am J Physiol Heart Circ Physiol. 2013 Sep 15;305(6):H894-902. doi: 10.1152/ajpheart.00174.2013. Epub 2013 Jul 12.
[PubMed]

Genetic heterogeneity of diffuse large B-cell lymphoma.
Zhang J, Grubor V, Love CL, Banerjee A, Richards KL, Mieczkowski PA, Dunphy C, Choi W, Au WY, Srivastava G, Lugar PL, Rizzieri DA, Lagoo AS, Bernal-Mizrachi L, Mann KP, Flowers C, Naresh K, Evens A, Gordon LI, Czader M, Gill JI, Hsi ED, et al.
Proc Natl Acad Sci U S A. 2013 Jan 4. [Epub ahead of print]
[PubMed]